| Advanced Natural Resource Sampling | ESPM | 202 | Biging | Fall |
| Advances in Studies of Environmental Change | GEOG | 243 | Chiang, Cuffey, Rhew | |
| Analysis of Environmental Data | EPS | C120 | Kirchner | Fall |
| Analysis of Environmental Data | ENE, RES | C130 | Kirchner | Fall |
| Applications of Energy Efficiency and Conservation | ENE, RES | 199 | | Fall and Spring |
| Applied Geophysics | EPS | C178 | Rector | Fall |
| Arthropod-Borne Zoonotic Diseases: Basic Principles and Methods of Study | ESPM | 145 | Lane | Spring |
| Atmospheric Chemistry | EPS | C182 | Boering | Spring |
| Atmospheric Physics and Dynamics | EPS | 181 | Chiang, Fung | |
| Atmospheric Physics and Dynamics | GEOG | C139 | Chiang, Fung | |
| Biology and Geomorphology of Tropical Islands | ESPM | C107 | | Fall |
| Biology of Aquatic Insects | ESPM | 115B | Resh | Fall |
| Biometeorology | EPS | C129 | Baldocchi | Fall |
| Biometeorology | ESPM | C129 | Baldocchi | Fall |
| Case Studies in Earth Systems | EPS | C150 | Burgmann | |
| Chemical Ecology | ESPM | 119 | Kubo | Fall |
| Crossroads of Earth Resources and Society | LNS | 170AC | Birmhall | |
| Earth Systems Science | GEOG | 242 | Chiang, Cuffey | |
| Ecosystem Ecology | ESPM | 111 | Battles, Silver | Spring |
| Environmental Analytical Chemistry | CIV ENG | 214 | Sedlak | Spring |
| Environmental Aqueous Geochemistry | ESPM | C128 | Sposito | Spring |
| Environmental Biology | ESPM | 6 | Chapela | Fall |
| Environmental Chemical Kinetics | CIV ENG | 217 | Sedlak | Spring |
| Environmental Chemistry | ESPM | 4 | Huisman | Spring |
| Environmental Earth Sciences | EPS | 80 | Berry | Fall and Spring |
| Environmental Physics | ESPM | 80 | | |
| Environmental Problem Solving | ESPM | 100 | Frankie, Milton | Fall |
| Environmental Soil Chemistry | ESPM | 126 | Doner | Spring |
| General Entomology | ESPM | 140 | Purcell, Roderick | Spring |
| Geochemistry | EPS | 131 | Helgeson | |
| Geostatistics and Stochastic Hydrogeology | CIV ENG | 202B | Rubin | Spring |
| Global Change and Biogeochemistry | GEOG | 143 | Rhew | |
| Graduate Seminar on Beta Diversity | ENE, RES | 290 | Paul Fine, David Ackerly and John Harte | Fall |
| Hydrogeology | EPS | 105 | | |
| Insect Ecology | ESPM | 113 | Welter | Spring |
| Insect Physiology | ESPM | 144 | Tanouye | Spring |
| Introduction to Environmental Sciences | ENV SCI | 10 | | Fall and Spring |
| Introduction to Marine Geochemistry | EPS | 103 | | |
| Introduction to the Methods of Environmental Science | ENV SCI | 100 | Sousa | Spring |
| Isotopic Geochemistry | EPS | 124 | DePaolo | |
| Isotopic Geochemistry | EPS | 224 | DePaolo | |
| Laboratory in Natural Resource Sampling | ESPM | 102BL | Allen-Diaz | Fall |
| Marine Geobiology | EPS | 185 | Berry | Fall |
| Marine Hydrodynamics II | MEC ENG | 241B | Yeung | Fall and Spring |
| Methods in Ecology and Environmental Biology | INTEG BI | 256 | | |
| Microbial Ecology | ESPM | 112 | Huissman | Spring |
| Modeling Ecological and Meterological Phenomena | ENE, RES | C202 | Harte | Fall |
| Molecular Approaches to Environmental Problem Solving | ESPM | 192 | Lindow | Fall |
| Molecular Ecology | ESPM | C149 | | |
| Molecular Ecology Laboratory | ESPM | 149L | | |
| Natural Resource Sampling | ESPM | 102B | Allen-Diaz | Fall |
| Pesticide Chemistry and Toxicology | ESPM | C148 | Cassida | Spring |
| Principles of Conservation Biology | ESPM | 103 | Beissinger | Fall and Spring |
| Principles of Conservation Biology | INTEG BI | C156 | Beissinger | Fall and Spring |
| Principles of Phylogenetics: Ecology and Evolution | INTEG BI | 200B | Mishler | Spring |
| Problems in Hyrdogeology | EPS | 200 | | |
| Quantitative Analysis of Earth Sciences | EPS | 60 | | |
| Quantitative Methods for Ecological and Environmental Modeling | INTEG BI | C205 | | Fall |
| Quantitative Methods for Ecological and Environmental Modeling | ENE, RES | C205 | Getz | Fall |
| Research in Agricultural and Environmental Chemistry | AGR CHM | 299 | | Fall and Spring |
| Soil Microbial Ecology | ESPM | 131 | Firestone | Fall |
| Spider Biology | ESPM | 132 | Gillespie | Spring |
| Terrestrial Resource Ecology | ESPM | 102A | McBride | Fall |
| The (Secret) Life of Plants | PLANT BI | 40 | Zambryski | Spring |
| The Biosphere | ESPM | 2 | Banfield, Gutierrez | Fall |
| Tools for the Trade | ENE, RES | 292A | Kammen | Fall |
| Training in Stable Isotope Methods and Mass Spectrometery | INTEG BI | 400 | Dawson | Fall and Spring |
| Urban Garden Ecosystems | ESPM | 117 | Altieri | Fall |
| Water in Terrestrial Environment | ESPM | C130 | Narasimhan | |
| Wildlife Ecology | ESPM | 114 | Brashares | Fall |
